PIPES-2Na, or Piperazine-N,N'-bis(2-ethanesulfonic acid) disodium salt, is a salt form of the PIPES buffer compound.

PIPES-2Na, or Piperazine-N,N'-bis(2-ethanesulfonic acid) disodium salt, is a salt form of the PIPES buffer compound.

1. Chemical Structure and Properties:

   - PIPES-2Na is the disodium salt of PIPES, formed by neutralizing PIPES with sodium hydroxide.
   - It is a white, crystalline powder that is highly soluble in water and other polar solvents.
   - PIPES-2Na has a pKa value of around 6.8, similar to the free acid form of PIPES.

2. Applications:

   - PIPES-2Na can be used as an alternative to the free acid form of PIPES in various biochemical and molecular biology applications.
   - Protein Purification: PIPES-2Na can be used as a buffer component in protein purification techniques, such as ion-exchange chromatography and affinity chromatography.
   - Enzyme Assays: PIPES-2Na buffers can help maintain the optimal pH environment for enzymatic reactions and activity measurements.
   - Nucleic Acid Manipulation: PIPES-2Na can be used as a buffer in applications involving DNA and RNA, such as gel electrophoresis and enzymatic reactions.
   - Cell Culture: PIPES-2Na may be included in cell culture media to help maintain the desired pH range for cell growth and metabolism.

3. Advantages:

   - pH Buffering Range: PIPES-2Na, like the free acid form, is effective in maintaining a pH range of approximately 6.1-7.5, making it suitable for applications that require a slightly acidic to neutral environment.
   - Solubility: PIPES-2Na has excellent solubility in water, allowing for easy preparation of buffer solutions.
   - Stability: The sodium salt form of PIPES can be more stable and less prone to degradation compared to the free acid form.

4. Considerations:

   - Temperature Dependence: The pH of PIPES-2Na buffer solutions can be affected by temperature, so the pH should be carefully monitored and adjusted as needed.
   - Potential Interactions: As with any buffer, PIPES-2Na may interact with certain compounds or materials, so its compatibility should be evaluated for specific applications.

Overall, PIPES-2Na is a useful alternative to the free acid form of PIPES, offering similar pH buffering capabilities and potential advantages in terms of solubility and stability.